FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180002

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180002
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19023738
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCATA50100.06.17882638
AGTGAGT29052.6697307E-85.98918771
TTAGCAT49500.05.81735477
CCTTTAG43401.8189894E-125.80577854
CTTTAGC64300.05.37418275
TTTAGCA68400.05.0519136
Produced by FastQC (version 0.11.5)