FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19631179
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCATC67100.08.3689518
GATAGCA92600.06.84237866
ATAGCAT93800.06.67752177
CCGATAG91800.06.2746644
CTAAGAG25651.0347685E-76.1749618
CCCTAAG22451.7049515E-55.7728676
CGATAGC108650.05.56663475
TACCCTA38708.596544E-85.02337934
Produced by FastQC (version 0.11.5)