FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180108

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180108
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17699997
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAAGGGG54300.014.3193989
TAGCATG56700.013.2053868
AGTGAAT113900.07.7568021
ATAAGGG107000.07.67046938
GTGAATA136100.06.5087312
CCTTTAG117500.06.49539664
CTAGGAG27600.06.1561650-54
TTAGCAT144350.05.8852497
TATAAGG155750.05.8242787
AGCATGA182500.05.0494959
TTCTAGG37100.05.00671450-54
Produced by FastQC (version 0.11.5)