FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180114

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180114
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15403942
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTAAAC30600.010.3593913
CTAAACA32700.09.68633654
AACACTA36700.07.8459797
ATACTAA51300.07.8163041
ACACTAT43250.07.4899628
CACTATA42050.07.0189339
TAAACAC58000.05.83343655
TACTAAA65500.05.2799152
Produced by FastQC (version 0.11.5)