FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180127

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180127
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13778494
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGACTC47050.011.7949662
AGAGACT57850.09.8800741
AGACTCA64700.08.908923
GACTCAA82850.07.04420334
TCTCACA54050.06.9605591
CTCACAG64050.05.96378952
ACTCAAA107600.05.95600945
TCACAGT70650.05.2011263
TGTCTAG16900.05.112018140-144
GTCTAGT17050.05.0670447140-144
CTAGGAG6552.1010546E-65.05607150-54
Produced by FastQC (version 0.11.5)