FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180164

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180164
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15403455
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA124650.08.1442379
AACACTA38450.07.86459837
CACTATA43950.07.3718629
AGAGCAC138650.07.2180278
GATCGGA139350.07.1831681
ACACTAT44200.07.16727358
TCGGAAG187700.05.8311423
ATCGGAA197850.05.6776672
AAGAGCA200500.05.49415167
CTAGATC11153.6379788E-125.036769140-144
Produced by FastQC (version 0.11.5)