FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180192

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180192
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14815214
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA141350.07.38344579
CCTAGAT11500.00183117196.99960231
AGAGCAC160250.06.69222748
GATCGGA198850.05.3360631
TCGGAAG208800.05.13926123
Produced by FastQC (version 0.11.5)