FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180194

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180194
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14112676
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA157150.09.8501569
AGAGCAC162450.09.262878
GATCGGA168300.09.1995311
TCGGAAG207350.07.32765673
ATCGGAA221700.07.21079642
AAGAGCA250850.06.1421257
GGAAGAG304050.05.42262365
GAAGAGC316850.05.29445466
CGGAAGA307150.05.1806454
Produced by FastQC (version 0.11.5)