FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180197

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180197
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16145880
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTTAG27400.08.1450265
CCTTAGA38200.06.78431036
CTTAGAG35100.06.76805647
TAGAGCC46953.6379788E-125.52021939
CCCCTTA40753.2014214E-105.47750434
TTAGAGC39608.785719E-105.4542758
Produced by FastQC (version 0.11.5)