FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180201

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180201
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14810638
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA186350.07.61148361
AGAGCGT195350.07.3713858
ACACTAT46350.06.67961178
AACACTA47600.06.65546277
GAGCGTC224200.06.519189
TCGGAAG227600.06.48506163
AAGAGCG233500.06.1053537
CACTATA45650.05.9934289
ATCGGAA264150.05.8330492
TAGATCT59300.05.439460840-44
GAAGAGC277600.05.3688766
GGAAGAG298550.05.23329455
Produced by FastQC (version 0.11.5)