FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180241

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180241
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15839778
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCATG23400.09.5351018
AGTGAGT30750.08.7747581
TAAGGGG34050.08.0324129
GTGAGTA34200.07.7916982
TTAGCAT48050.05.69206337
CCACTCA40202.2555469E-105.55028349
TCTTTAG59750.05.18117144
CTAGGAG10254.1836756E-115.055824350-54
Produced by FastQC (version 0.11.5)