FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180243

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180243
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13843593
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGA81100.06.30332951
GTATCCA91450.05.9048661
GTAATAA99600.05.71084361
TAACCCC29251.3165154E-65.4153859
TAATTGC65100.05.30875545
GTGTCTA20950.00135571955.1551311
CCCTAAC18250.0080806825.1287671
GTGTAAA64000.05.06249951
GTATGCT88600.05.0383751
Produced by FastQC (version 0.11.5)