FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180271

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180271
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15039818
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTCGAA135250.08.3191881
GGTCGGG131450.07.0589591
GGTCGAG171100.06.96041441
GGTCGGA134800.06.5583261
GGTCGAC87350.06.0223651
GGTAGCG97900.05.59726761
GGTAGCA39756.6211214E-105.51418921
GATCGAA146050.05.50286151
GGTCGGC262450.05.2615381
GGTAAGG97250.05.25903371
GGTCGCG178350.05.2436581
GGTAGAA75850.05.1052591
Produced by FastQC (version 0.11.5)