FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180297

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180297
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16656769
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTTCAC179350.07.03947261
CCTACAC67050.06.5305221
CCTGCAC203900.06.1919051
CTAGGAC15800.00125051456.00456671
CCTTGAT217000.05.8181081
CCTTCAT210600.05.7176951
TTGCGCG104600.05.6434277
CATGAGG82400.05.57967331
CTAGTGG30955.234324E-75.42328741
CCTGCAT205200.05.37025641
CATTACC154950.05.1336981
CTATTGG89200.05.07250261
CAACACC174800.05.00997161
Produced by FastQC (version 0.11.5)