FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180299

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180299
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13549334
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA36750.010.7699399
GATCGGA131600.07.55042841
TCGGAAG148200.06.5553133
GCCACTC64000.06.1843018
AGAGCGT147650.05.9948678
AGCCACT68450.05.9925177
ATCGGAA170600.05.94788272
GGCCTAA15450.05.12361275-79
Produced by FastQC (version 0.11.5)