FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180373

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180373
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18412453
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA203600.08.0932711
TCGGAAG218150.06.8609213
AGTGTAG44800.06.84189125-29
GAGTGTA49850.06.264250825-29
ATCGGAA250050.06.2447382
AGAGCGT268400.05.7902178
AAGAGCG326650.05.2201417
Produced by FastQC (version 0.11.5)