FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180377

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180377
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14024115
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCTAG5300.001482750810.8658479
AGTGAGT31950.010.7542261
GTGAGTA36350.09.3083752
TAACCCC51750.07.6507119
TCCGATC106650.07.2889656
ACACTCT44900.07.16404871
CTTCCGA107450.06.76701164
TTCCGAT122300.06.3567615
GAGTATA71750.05.5185224
CACTCTT58050.05.45671032
CCGATCT161100.05.04879147
Produced by FastQC (version 0.11.5)