Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005180398 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16067371 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTAAGAG | 3310 | 0.0 | 9.785819 | 8 |
GTCCCTA | 2510 | 0.0 | 9.766284 | 3 |
CCCTAAG | 3535 | 0.0 | 9.366581 | 6 |
TACCCTA | 4445 | 0.0 | 8.096754 | 4 |
ACCCTAA | 5225 | 0.0 | 7.1635737 | 5 |
CCTAAGA | 5330 | 0.0 | 6.6173115 | 7 |
GAGCACA | 18320 | 0.0 | 6.0900226 | 9 |
AGAGCAC | 19040 | 0.0 | 5.859728 | 8 |
TAAGAGC | 6920 | 0.0 | 5.51293 | 9 |
GTACCCT | 6595 | 0.0 | 5.3568 | 3 |
GATCGGA | 22775 | 0.0 | 5.1299653 | 1 |
CTAGATC | 1305 | 0.0 | 5.076102 | 140-144 |