FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180426

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180426
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14032598
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACCCC42350.021.7571749
AGTGAGT59200.017.3120141
GTGAGTA58100.016.744582
ATAACCC84950.011.7786998
GAGTATA120250.08.1417894
TGAGTAT132850.07.7027073
GTATAAC137400.07.5967396
TATAACC139100.07.50389587
AGAGCAC138450.06.08329448
GAGCACA132600.06.0802369
AACCCCC37500.05.68209510-14
GACCCTA42100.05.0620185-89
CGCCTAA42650.05.029780445-49
Produced by FastQC (version 0.11.5)