FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180442

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180442
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13680720
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA124500.08.3827879
AGAGCAC124850.08.3016388
GATCGGA136950.07.7070831
TAGATCG39250.05.576016140-144
CTAGATC10053.6379788E-125.3009753140-144
ATCGGAA245800.05.0407692
AAGAGCA223650.05.0204837
GAAGAGC215250.05.01577336
Produced by FastQC (version 0.11.5)