FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180443

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180443
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13680720
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC124350.07.9308049
GATCGGA139150.07.0381281
AGAGCGT149100.06.7592118
AAGAGCG165150.06.27591567
CTAGATC12100.06.0682874140-144
TAGATCT38500.05.908916540-44
TAGATCG41050.05.4713283140-144
GAAGAGC213650.05.18813236
Produced by FastQC (version 0.11.5)