FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180445

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180445
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17687927
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA304100.07.1284931
TCGGAAG302050.07.0797583
AGAGCGT288900.06.9033258
ATCGGAA324700.06.6759172
AAGAGCG335400.06.2467777
GAGCGTC385300.05.56856549
GGAAGAG386150.05.55638655
GAAGAGC430300.05.2372736
CGGAAGA433800.05.07893564
Produced by FastQC (version 0.11.5)