FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180461

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180461
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15445138
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGTTAA37850.09.3207884
TACGTTA42100.08.3799093
GTTACGT49450.07.26584341
AACATAC94350.06.56227
ACATACC95700.06.545248
CATACCA110650.05.53080759
CGTTAAT53405.456968E-125.12304545
Produced by FastQC (version 0.11.5)