FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180569

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180569
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12796195
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT37101.4551915E-116.15478131
TGAGTAG33452.935849E-95.81022073
TAGGAGG40153.6379788E-115.7341917
GTGAGTA36506.493792E-105.721572
GAGTAGG39901.8371793E-105.59260034
GATCGGA105900.05.07752131
Produced by FastQC (version 0.11.5)