FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180576

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180576
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15838341
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA167100.08.5930121
GAGCACA176950.08.136519
AGAGCAC185800.07.86518678
TCGGAAG186100.07.86144263
ATCGGAA196700.07.65763242
AAGAGCA248350.06.3769927
GAAGAGC277750.05.5983116
GGAAGAG285300.05.3245
CGGAAGA293500.05.15072734
Produced by FastQC (version 0.11.5)