FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180577

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180577
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15838341
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA181250.07.91113661
TCGGAAG200650.07.03147033
ATCGGAA203400.06.91059262
AGAGCGT212350.06.6099468
AAGAGCG240750.05.890047
GAGCGTC255900.05.68201169
TAGCGTA53800.05.030574330-34
GGAAGAG291900.05.00587755
Produced by FastQC (version 0.11.5)