FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180612

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180612
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11681688
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGTACC38250.08.8463058
TCCCCAT80650.08.3907797
ATCCCCA93100.07.50068246
AACGTAC45950.07.36361557
TCATCCC99950.07.1318734
CCCATCC92400.07.09018339
ATCTCAT97800.07.0726481
CCCCATC98250.06.66813378
TCTCATC105000.06.3781282
CATCCCC131550.05.6366545
CGTACCC65450.05.6098159
CTCATCC127700.05.46991353
AAACGTA65550.05.2716596
Produced by FastQC (version 0.11.5)