FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180613

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180613
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11681688
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGTACC43650.010.8799928
CCCCTAA17001.8189894E-129.7365163
AACGTAC49600.09.1396127
ATCCCCA91250.07.3336296
TCCCCAT80650.07.22685777
AAACGTA69850.07.1080676
CGTACCC68400.07.04835229
TCATCCC96750.06.6198314
CCCATCC95150.06.57929479
ATCTCAT100400.06.4451931
CCCTAAA28102.2992026E-96.40238244
CCCCATC98950.06.2539088
TCTCATC102100.05.92241762
CATCCCC133550.05.4418475
TCCCCTA30605.48187E-75.41068032
CTCATCC122800.05.2157443
Produced by FastQC (version 0.11.5)