FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180676

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180676
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14626208
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCTATA76700.06.3821576
TTGTCTA83700.06.10608774
CCCTTAG23003.994479E-65.9464255
TGTCTAT102650.05.3996055
TACTCAT81350.05.3091365
CTATACT70450.05.213512
Produced by FastQC (version 0.11.5)