FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180681

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180681
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10744580
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCATG25600.09.8416348
AGTGAGT28650.07.72582441
GTGAGTA31650.07.0576792
TAACCCC37500.06.71855559
TTAGCAT42450.06.6133887
CCTTTAG42200.06.14080244
TTTAGCA58750.05.7583866
CTTTAGC60350.05.0093675
Produced by FastQC (version 0.11.5)