FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180715

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180715
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15249526
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAGACC24400.010.3265947
TAGACCC29200.08.3825278
TAGTTAG34653.6379788E-126.44110164
AGTTAGA44201.8189894E-125.7009535
AGACCCC46851.4551915E-115.3782059
GTTAGAC45704.1836756E-115.3560136
Produced by FastQC (version 0.11.5)