FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180718

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180718
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16449526
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA185400.09.6554541
AGAGCAC225800.08.0027378
GAGCACA241250.07.55000459
TCGGAAG250800.07.0645613
ATCGGAA310650.06.00482942
CGCGCTA19659.10252E-55.86448242
TAGATCG57000.05.3302584140-144
CGGAAGA349250.05.1556234
CTAGATC17150.05.1216083140-144
Produced by FastQC (version 0.11.5)