FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180722

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180722
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12187133
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGGGT33100.010.1160761
CTTGGGA56850.09.9872611
CTTGCGA116950.08.9628181
GTTGGGA59800.08.6425011
CTTGGTA49700.08.201891
CTTGCTA33350.07.8575821
GTTGCGA102000.07.8500931
CTTGGCA108900.07.8206031
CTTACCC43100.07.60006861
GGTGGGA50950.07.5720581
TTGGGAT72850.07.4114422
CTTGGTG81350.07.33733841
CTTGGGG50950.07.286321
CTTGTCA111950.07.2174061
GTTGGTA61800.06.83158971
CTTCCGA140900.06.61273671
CTAAGCT15651.631618E-46.51172351
CTTGTGA66350.06.47281741
CTTGGAG60450.06.38207441
GTTGGCA89300.06.35807131
Produced by FastQC (version 0.11.5)