FastQCFastQC Report
Sat 11 May 2024
EGAF00005180767

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180767
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13781001
Total Bases2 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG1291570.9372105843399909No Hit
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA947930.6878527909547355No Hit
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA628080.4557578945099851No Hit
ATACAAACACTATAGCTCTCAAAATTTAAAGTACTAAATCCTTGAGGCCC259590.188368029289019No Hit
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTACAGTGGTGTGTAGATCT158760.11520208147434283Illumina Single End PCR Primer 1 (97% over 35bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)