FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180839

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180839
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17236152
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTTTAG36150.07.9643863
TGAGTAG33450.07.5313443
GTTTAGA43950.06.55087334
GTGAGTA47950.06.02150152
AGTGAGT41809.094947E-125.82294651
GAGTAGG49351.8189894E-125.3965064
TTAGAAC53801.8189894E-125.21833666
Produced by FastQC (version 0.11.5)