FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180909

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180909
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13636068
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA50000.08.6377369
CCGTTAA47200.06.863594
GCCACTC66100.06.75163468
AGCCACT80100.06.20146377
GGCCTAA16700.05.603930575-79
CGTTAAA58300.05.55685
Produced by FastQC (version 0.11.5)