FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005180988

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005180988
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14971458
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCACTA48500.09.202868
CCTAGAC9950.08.682277120-124
CTAGACC12600.07.1990547120-124
ATCCTAG13350.07.0103717115-119
ACAACAC93250.05.6417353
ATACAAC95600.05.5512331
CCACTAC87450.05.51605379
TCCTAGA16050.05.472223115-119
CACCACT86300.05.2553627
GGTCCTA20150.05.073265645-49
Produced by FastQC (version 0.11.5)