Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005180997 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14782576 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGCTCAA | 11060 | 0.0 | 15.603652 | 7 |
CTCAAAC | 12155 | 0.0 | 13.901902 | 9 |
ATGGCTC | 12375 | 0.0 | 13.306259 | 5 |
TGGCTCA | 13195 | 0.0 | 12.424976 | 6 |
GCTCAAA | 15305 | 0.0 | 10.946828 | 8 |
TCTGATG | 15135 | 0.0 | 10.773471 | 1 |
GATGGCT | 16605 | 0.0 | 10.219716 | 4 |
CTGATGG | 21590 | 0.0 | 7.7272434 | 2 |
CTCGGGT | 4300 | 0.0 | 7.7257195 | 20-24 |
TGATGGC | 23925 | 0.0 | 7.363425 | 3 |
CCTCTAG | 1520 | 0.0 | 6.7180386 | 50-54 |