FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181023

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181023
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14108012
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCACTGT107250.014.7122691
CACTGTC101700.013.025112
ACTGTCG83300.08.1244423
GCACAGT84350.07.62115431
GCACTGA120950.07.18727541
GCACTAG11500.00186510636.9874391
CACAGTC69550.06.9352512
CACTGAC93350.06.6323682
ACTGTCT87100.06.034143
ACTGTCC97850.05.37121733
GCACTTT135050.05.35505251
ACTGTCA91150.05.13413573
GCACTGG142600.05.1227561
GGGGGGT21550.00162721415.08472161
CACTGTA74500.05.02494862
Produced by FastQC (version 0.11.5)