FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181052

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181052
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14302132
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA94250.036.4347725
CAGTGGT98600.035.1964844
AGCAGTG126050.027.7022082
GTGGTAT128450.026.4528086
GCAGTGG140750.024.6051393
TGGTATC156000.021.965767
GGTATCA161750.021.5854638
GTATCAA161950.021.5588049
AAGCAGT180950.019.540351
TCTTGGG102650.06.943650235-39
GCAGAGT116450.06.565076415-19
CAACGCA142350.05.572834510-14
AACGCAG146350.05.34181910-14
CGCAGAG163100.05.022767515-19
Produced by FastQC (version 0.11.5)