Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005181087 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 12963639 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTAGCGC | 940 | 0.0 | 33.432377 | 1 |
CTAGAGC | 965 | 0.0 | 21.963285 | 1 |
CTAACGC | 2440 | 0.0 | 21.865513 | 1 |
CTAGGGC | 745 | 0.0 | 21.582067 | 1 |
CTAGCAC | 805 | 0.0 | 20.881351 | 1 |
CTAGCTC | 800 | 0.0 | 19.184742 | 1 |
CTAGTGC | 710 | 0.0 | 17.49916 | 1 |
CTAGCGT | 705 | 2.9594958E-9 | 14.513279 | 1 |
CTAGCCC | 830 | 2.062734E-9 | 13.208082 | 1 |
CTAGGCC | 505 | 5.9864014E-5 | 13.025002 | 1 |
CTAATGC | 2575 | 0.0 | 11.636791 | 1 |
CTATCGC | 10020 | 0.0 | 10.211439 | 1 |
CTAGCGA | 955 | 2.3561697E-6 | 9.948707 | 1 |
CTAGCGG | 955 | 2.541505E-5 | 9.183422 | 1 |
CTAGAGG | 730 | 0.0018061701 | 9.010447 | 1 |
CTAGAAC | 905 | 1.4230261E-4 | 8.883227 | 1 |
CTAACTC | 1885 | 1.5643309E-10 | 8.529783 | 1 |
CGCTAGG | 885 | 0.0012920544 | 8.1362 | 5 |
TCTAGAG | 810 | 0.005292038 | 8.000658 | 6 |
CTAAAGC | 3575 | 0.0 | 7.5640135 | 1 |