FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181092

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181092
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15586334
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA38300.011.08941657
CACTATA43300.010.1413879
ACACTAT43650.09.7302328
CTAGGCG8159.094947E-125.830272770-74
AAACACT82550.05.4937716
GGGGGGG56550.05.3497922
ACTAGGC9752.6557245E-105.02119270-74
Produced by FastQC (version 0.11.5)