FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181095

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181095
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14144445
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA105900.017.265227
CTCAAAC124450.016.0798789
CTCCCTA41750.015.3443844
ATGGCTC122500.015.277645
TGGCTCA124100.015.196946
TTAGTCC32550.013.4899919
CCCTATT56750.013.4451816
CTTAGTC32050.013.2512488
GCTCAAA154650.012.6605268
CCTTAGT38350.011.4498247
GATGGCT170500.011.1876124
TCTGATG176000.011.0103231
TCCCTAT69500.010.2534355
CTGATGG233050.08.5868652
GCTCCCT86250.08.4295193
CTCGGGT49050.07.8952920-24
TGATGGC260700.07.7866123
TCCTTAG64450.07.59473566
TGCTCCC109850.06.74957042
CCTATTT117450.06.0675947
Produced by FastQC (version 0.11.5)