FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181124

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181124
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9964903
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT69100.036.991794
AGTGGTA75400.034.4690935
AGCAGTG79150.032.2928472
GCAGTGG89150.028.429973
GTGGTAT105750.024.5074836
AAGCAGT121600.021.5861151
GTATCAA129600.019.830789
TGGTATC135750.019.250567
GGTATCA138450.018.5631568
CAACGCA80950.07.22087110-14
TCTTGGG76100.06.925392635-39
AACGCAG87150.06.64108610-14
GCAGAGT87700.06.287523315-19
TCAACGC106200.05.8158510-14
ACGCAGA109350.05.46398815-19
CGCAGAG115000.05.308214715-19
Produced by FastQC (version 0.11.5)