FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181148

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181148
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11276557
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT63900.029.9715354
AGTGGTA75550.026.112255
AGCAGTG84900.023.1544862
GCAGTGG91600.021.380273
GTGGTAT110300.018.016146
TGGTATC130950.015.1201247
AAGCAGT139100.014.6069691
GGTATCA137650.014.2782868
GTATCAA154400.013.0557089
CAACGCA85650.05.312331710-14
TCTTGGG80700.05.209927635-39
GCAGAGT88850.05.039997615-19
Produced by FastQC (version 0.11.5)