FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181149

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181149
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11276557
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA82400.015.4652437
CTCAAAC87400.014.4973579
TGGCTCA88800.014.1081526
ATGGCTC92300.013.8071945
GCTCAAA116050.011.167048
GATGGCT125250.010.29501154
TCTGATG127950.010.1052161
CTCGGGT32850.08.15251620-24
TGATGGC192300.07.08032663
CTGATGG185700.07.06370642
CTAGCAC7357.767085E-105.680944450-54
TCTAGGA10250.05.47836150-54
CTCTAGG9503.6379788E-125.456181550-54
CCTCTAG18900.05.10414450-54
AGGTCCT58750.05.0486245-49
Produced by FastQC (version 0.11.5)