FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181158

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181158
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18400867
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT119950.032.768944
AGTGGTA137850.028.5138515
AGCAGTG158700.025.2380562
GCAGTGG177050.022.1193833
GTGGTAT189150.021.046936
GGTATCA216750.018.4665478
AAGCAGT223950.018.241811
GTATCAA227150.017.9379869
TGGTATC222450.017.5402957
CAACGCA144500.06.137801610-14
AGTGAGT45650.06.06176231
GCAGAGT140850.05.95957815-19
TCTTGGG140150.05.77385835-39
TAAGGGG49950.05.76493649
GTGAGTA52450.05.4937962
AACGCAG163100.05.402533510-14
CGAGTGT44205.0567905E-105.211924
TCAACGC181300.05.09843910-14
Produced by FastQC (version 0.11.5)