FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181172

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181172
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13577951
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT90900.025.346464
AGCAGTG104050.022.4915242
AGTGGTA115250.020.36615
GCAGTGG117300.019.8877753
GTGGTAT138900.017.2612886
AAGCAGT151100.015.6933771
TGGTATC164350.014.3692917
GGTATCA179050.013.5501358
GTATCAA190300.013.01390659
GCAGAGT88400.05.717213615-19
CGCAGAG98000.05.406936615-19
AACGCAG99300.05.307114610-14
Produced by FastQC (version 0.11.5)