FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181174

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181174
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11171375
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT84350.040.2051284
AGTGGTA91000.037.1036645
AGCAGTG99100.034.5835232
GCAGTGG116600.029.2701823
GTGGTAT117600.028.89346
AAGCAGT133700.026.287141
TGGTATC135250.025.3889687
GGTATCA138550.024.7842528
GTATCAA140100.024.510059
CAACGCA105450.07.277261710-14
TCTTGGG102150.07.118437335-39
GCAGAGT107500.07.05820415-19
AACGCAG107550.06.98791210-14
TCAACGC122200.06.42114810-14
ACGCAGA126550.06.246003615-19
CGCAGAG126800.06.07472415-19
TATCAAC145100.05.59627510-14
ATCAACG161000.05.03465710-14
Produced by FastQC (version 0.11.5)