FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181192

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181192
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12716748
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT86150.030.7512344
AGTGGTA93500.028.3338935
AGCAGTG100250.026.658432
GCAGTGG110650.024.0724533
GTGGTAT129250.020.5525576
AAGCAGT156700.017.4723781
GTATCAA164150.016.0951589
TGGTATC178750.014.9819017
GGTATCA183000.014.7126378
CAACGCA98050.05.99118310-14
TCTTGGG90500.05.982240735-39
AACGCAG111450.05.38711210-14
Produced by FastQC (version 0.11.5)